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Journal of the Chilean Chemical Society

On-line version ISSN 0717-9707

J. Chil. Chem. Soc. vol.53 no.3 Concepción Sept. 2008

http://dx.doi.org/10.4067/S0717-97072008000300003 

 

J. Chil. Chem. Soc, 53, N° 3 (2008) págs: 1568-1571

 

TEMPLATE SYNTHESIS OF NOVEL 14-MEMBERED TETRAAZAMACROCYCLIC TRANSITION METAL COMPLEXES: DNA CLEAVAGE AND ANTIMICROBIAL STUDIES

 

N. RAMAN,* J. DHAVEETHU RAJA AND A. SAKTHIVEL

Research Department of Chemistry, VHNSN College, Virudhunagar 626 001, India


ABSTRACT

A new series of 14 membered tetraazamacrocyclic complexes of type [ML]X2, where M=Ni(II), Co(II), Cu(II), Zn(II), Hg(II), VO(IV), Cd(II) and Mn(II); X2= 2C1- S042- have been synthesized by incorporating an N4 donor site via. the témplate condensation of o-phenylenediamine, formaldehyde, p-anisidine and metal salt. The structural features of the complexes have been confirmed by spectral and analytical data. From the data, a square-planar geometry around the central metal ion has been suggested except VO(IV) complex which has square-pyramidal geometry. The antimicrobial screening data show good results. From the nuclease activity of the abo ve metal complexes, it is inferred that only the copper and nickel complexes cleave DNA through redox chemistry.

Key words: o-phenylenediamine, p-anisidine, CT DNA, antimicrobial activity, nuclease activity


INTRODUCTION

Tetraazametal complexes are consideredtobe models formetalloporphyrins and metallocorrins due to their intrinsic structural properties. The uses of macrocyclic metal complexes as bioinorganic models have able portrayed in many reviews such as that of Vogt et al1, McLendon et al2, Coliman3, Jones et al4 Niederhoffer et al5, Alexander6 and Busch et al7.

There has been considerable interest in the synthesis of new macrocyclic transition metal complexes which stabilize the unusual oxidation states of transition metáis relative to that ofopen chain ligand complexes. The significant chemical behaviour of transition metal complexes very often depends on their facile redox properties. This is true to a good degree for the neutral and synthetic complexes involving macrocyclic ligands. During electrochemical reaction many tetradentate macrocyclic amines stabilize the unusual oxidation states of the transition metáis8,9. The stabilization of the unusual oxidation states of metal ions usually depends on the nature of donor site. Olson and Vasilevskis10 have shown that the tetraaza macrocyclic complexes stabilize the unusual oxidation states of the metal species.

Synthetic tetraaza macrocycle (N ) molecules are considered typically good models for oxygen carrier due to the presence of four nitrogen donor sites confined to a single four-fold or a slightly four fold plañe in a ringed structure, appropriate for metal ligand binding. A survey of the tetraaza macrocyclic ligand systems reported so far by earlier workers indicates that the ring size of 12-16 is most common for molecular model studies11,12, although the quadridentate macrocycles of smaller ring sizes could also be accommodated by the metal ion by coordination in a folded form. Much work has been done on the electrochemical stabilization of the unusual oxidation states of the copper by macrocyclic ligand of a variety of types.

Transition metal complexes that are suitable for binding and cleaving double-stranded DNA are of considerable current interest due to their various applications in nucleic acid chemistry like foot-printing and sequence-specific binding agents, for modeling the restriction enzymes in genomic research, and as structural probes for therapeutic applications in cáncer treatment13' 16. Cleavage of DNA can be achieved by targeting its basic constituents like base and/or sugar by an oxidative pathway or by hydrolysis of phosphoester linkages. Transition metal complexes are known to be useful for oxidative cleavage of DNA involving nucleobase oxidation and/or degradation of sugar by abstraction of deoxyribose hydrogen atom(s), while complexes containing strong Lewis acids like copper(II) are suitable for hydrolytic cleavage of DNA. Sigman and coworkers have reported bis(phen)copper(I) complex as the first copper-based "chemical nuclease" that cleaves DNA in the presence of H202 and a thiol13,17. The study of synthetic macrocyclic compounds is a very important área of chemistry in view of their presence in many biologically significant naturally occurring metal complexes, such as the metalloproteins, vitamin B12, chlorophyll etc. Tetraaza molecules, especially when coordinated to metal centers, are considerable to be model metalloporphyrins and metallocorrins due to the presence of four nitrogen donor sites in a ringed structure18-20. A literature search reveals that a large number of tetraazamacrocyclic transition metal complexes have been prepared and characterized but no work has been done on DNA and antibacterial activity of transition metal complexes containing tetradentate N4 donor type 14-membered tetraaza macrocyclic complexes using the témplate method. Henee, in this work, a new series of 14-membered tetraazamacrocyclic complexes has been synthesized by the témplate condensation of formaldehyde, o-phenylenediamine, p-anisidine and metal salts in ethanol medium. Their DNA cleavage study using calf thymus DNA (CT DNA) by gel electrophoresis technique has been carried out to understand the selectivity and efficieney of DNA and thus to develop new effective cleaving agents or useful DNA probes.

EXPERIMENTAL

Materials and Methods

All reagents and solvents were purchased commercially and used without further purification unless otherwise noted. Microanalytical data of the compounds were recorded at the Sophisticated Analytical Instrument Facility, Central Drug Research Institute (SAIF, CDRI), Lucknow. The mass spectra were done at the Sophisticated Analytical Instrument Facility (SAIF), Indian Institute of Technology, Mumbai. The IR spectra of the samples were recorded on a Perkin-Elmer 783 spectrophotometer in 4000-400 cm-1 range using KBr pellet. The UV-Vis. spectra were recorded on a Shimadzu UV-1601 spectrophotometer using DMF as solvent. The X-band ESR spectra of the complex was recorded at 300 K and 77 K at IIT, Mumbai using TCNE (tetracyanoethylene) as the g-marker. Magnetic susceptibility measurements of the complexes were carried out by Guoy balance using copper sulphate as the calibran! Electrochemical studies were carried out using EG&G Princeton Applied Research Potentiostat / Galvanostat Model 273 A, controlled by M270 software. CV measurements were performed using a glassy carbón working electrode, platinum wire auxiliary electrode and an Ag/AgCl reference electrode. All solutions were purged with N2 for 30 min prior to each set of experiments. The molar conductance of the complexes was measured using a Systronic conductivity bridge. Solutions of CT DNA (calf thymus DNA) in 50 mM NaCl / 50 mM tris-HCl (pH=7.2) gave a ratio of UV absorbance at 260 and 280 nm, A260/A280 of ca. 1.8-1.9, indicating that the DNA was sufficiently free of protein contamination. The DNA concentration was determined by the UV absorbance at 260 nm after 1:100 dilutions. The molar absorption coefficient was taken as 6600 M-1cm-1. Stock solutions were kept at 4°C and used after not more than 4 days. Doubly distilled H20 was used to prepare the buffer. The antimicrobial activities of the ligands and their complexes were carried out by well-diffusion method21.

General Procedure for the Syntheses of complexes

To a stirred ethanol solution of metal salts (0.01 M) slowly added o-phenylenediamine (0.02 M), formaldehyde (0.04 M) andp-anisidine (0.02 M). The mixture was heated under reflux for ca. 24 h. The solution was filtered under hot condition and the fíltrate was allowed to stand at room temperature. The precipítate formed was filtered off, washed with ethanol and further dried in vacuo.


Antimicrobial actvity

The in vitro biological screening effeets of the investigated compounds were tested against the bacteria: Salmonella typhi, Staphylococcus aureus, Escherichia coli, and Bacillus subtilis by the well diffusion method, using agar nutrient as the médium. The antifungal activities of the compounds were evaluated by the well diffusion method against the fungi viz., Aspergillus niger, Aspergillus flavus and Rhizoctonia bataicola cultured on potato dextrose agar as médium. Streptomycin and nystatin were used as reference drugs for bacteria and fungi respectively. The stock solution (10-2 M) was prepared by dissolving the compounds in DMSO and the solutions were serially diluted in order to find the MIC valúes. In a typical procedure, a well was made on the agar médium inoculated with microorganisms. The well was filled with the test solution using a micropipette and the píate was incubated for 24 h in the case of bacteria and 72 h for fungi at 35 °C. During this period, the test solution diffused and the growth of the inoculated microorganisms was affected. The inhibition zone developed, at which the concentration was noted.

Gel electrophoresis

The gel electrophoresis experiments were performed by incubation at 35°C for 2 h as follows: CT DNA 30 µM , 50 µM each complex and 50 µM H202 in 50 mM tris-HCl buffer (pH=7.2) were electrophoresised for 2 h at 50 V on 1% agarose gel using tris-aceticacid-EDTA buffer, pH = 8.3. After electrophoresis, the gel was stained using 1 µg/cm3 EB (Ethidiumbromide) and photographed under UV light.

RESULTS AND DISCUSSION

The synthesized complexes are found to be air stable and insoluble in water, but soluble in DMSO and DMF. The analytical data of the complexes together with some physical properties are summarized in Table 1. The mass, microanalytical data of the complexes correspond well with the general formula [ML]X2 [where M = Cu(II), Ni(II), Co(II), Zn(II), Hg(II), VO(IV), Cd(II) and Mn(II); X2 = 2Cl- SO42-; L = C30H34N6O2]. The higher conductance valúes of the chelates support their electrolytic nature of the metal complexes.


Mass spectra

The FAB mass spectrum of the copper complex shows a molecular ion peak at m/z 644 which confirms the stoichiometry of metal chelates as [ML]X2 type. It is also supported by the "Nitrogen Rule", since the compound possesses six nitrogen atoms. The mass spectra of the other complexes support the above stoichiometry. This stoichiometry is further supported by the microanalytical data of the complexes.

Infrared spectra

The preliminary identification of the macrocyclic complexes was done from their IR spectra. The complexes give no bands assignable to carbonyl group stretching modes. The sharp band observed around 3215 cm-1 may be assigned to υNH of the coordinated secondary amines. A medium intensity band appearing in the 2835-2970 cm-1 región corresponds to uCH. The bands observed at 1400-1440, 1060-1080 and 710-730 cm-1 región can be assigned to phenyl ring vibrations22. In all of the metal complexes, a band seen in the 450-500 cm-1 región is probably due to the formation of M-N bonds23,24. In addition to the other bands, the vanadyl complex shows an additional band at 960 cm-1attributed to the V=0 frequeney25.

Electronic absorption spectra

The electronic absorption spectra of Cu(II), Ni(II), Co(II) and VO(IV) complexes were recorded at 300 K. The absorption región assigned and the proposed geometry of the complexes are given in Table 2. The electronic spectrum of Cu(II) complex shows a band at 17310 cm-1 which is assigned to 2B1g —>2A1g transition, characteristic for square-planar geometry. The absence of band below 10000 cm-1 exeludes the possibility of tetrahedral geometry. In the Co(II) complex, the band appearing at 19710 cm-1 is attributed to 1A1g —> 1B1g which suggests a square-planar geometry. For Ni(II) complex, the two d-dbands appearing at 21611 and 18917cm-1 are assigned to 1A1g —>1A2g and 1A1g—>1B1g transitions respectively, confirming the square-planar geometry for this complex. The observed zero magnetic moment confirms the square-planar environment for the Ni(II) complex in conformity with the fact that all known square-planar complexes of Ni(II) are diamagnetic. For VO(IV) complex, the two bands observed at 12545 and 18610 cm-1 are assigned to 2B2—>2E and 2B2—>2At transitions respectively which are consistent with that of five coordinated square-pyramidal geometry. No transitions were observed in the visible región for Zn(II), Hg(II), Cd(II) complexes consistent with the d10 configuration of the Zn(II), Hg(II), Cd(II) ions. These complexes are also found to be diamagnetic as expected for d10 configuration. For Mn(II) complex, there is no allowed d-d transitions. These data are comparable with that of the other reported complexes26-29. Furthermore, the magnetic susceptibility valúes (Table 1) reinforce the conclusión drawn from the electronic spectral data of the complexes.


ESR spectra

The ESR spectrum of copper complex, recorded in DMSO at 77 K (LNT) and 300 K (RT), provides useful information which is important in studying the metal ion environment. The RT spectrum shows one intense absorption band in the high field región and it is isotropic, due to the tumbling motion of the molecule. But LNT spectrum shows four well resolved peaks with low field región and one intense peak in the high field región. The magnetic moment of the copper complex is 1.78 B.M which corresponds to one unpaired electrón, indicating that the complex is mononuclear. This fact was also evident from the absence ofhalf field signal at 1600 G due to the m = ±2 transitions, ruling out any Cu-Cu interaction. The complex exhibits the gnvalue of 2.34 and g±value of2.06. The g-tensor valúes of the copper complex can be used to derive the ground state. In square-planar complexes, the unpaired electrón lies in the d 2 2 orbital giving 2B1g as the ground state with 2, while the unpaired electron lies in the dx2-y2 orbital giving 2A1g as the ground state with 2. From the observed values, it is clear that = 2.06 > 2 and coincide well with related systems which suggest that the complex has square-planar geometry and system is axially symmetric30-32. This is also supported by the fact that the unpaired electrón lies predominantly in the dx2-y2 orbital. In the axial spectra, the g-values are related with exchange interaction coupling constant (G) by the expression,

According to Hathaway33, if the G value is larger than four, the exchange interaction is negligible because the local tetragonal axes are aligned parallel or are slightly misaligned. If the value of G is less than four, the exchange interaction is considerable and the local tetragonal axes are misaligned. For the present copper complex, the G value is 5.8 which suggest that the local tetragonal axes are aligned parallel or are slightly misaligned and consistent with dx2-y2 ground state.

The ESR spectrum of the vanadyl complex, recorded in DMSO solution at 300 and 77 K shows a typical eight line and sixteen line patterns respectively. The isotropic ESR parameters giso = 1.96 and Aiso = 108 can be calculated from the position spacing of the resonance lines from the room temperature solution spectrum of the complex. The spectrum is like a typical eight line pattern which shows that a single vanadium is present in the molecule i. e., it is a monomer. In the frozen solid state, the spectrum shows two types of resonance components, one set due to the parallel features and the other set due to the perpendicular features, which indícate axially symmetric anisotropy with well resolved sixteen line hyperfine splitting, characteristic of an interaction between the electrón and vanadium nuclear spin. From the anisotropic spectrum, the anisotropic parameters were calculated. The observed order ( > g11 = 1.97) indicates that the unpaired electrón is present in the d orbital with square-pyramidal geometry around the VO(IV) ion34,35.

Based on the above spectral and analytical data, the proposed structure of the metal complexes is given in Figure 1.


Redox studies

The eyelie voltammograms of copper and vanadyl complexes were recorded in DMSO solution. A noteworthy feature has been observed in the eyelie voltammograms of copper and vanadyl complexes which are shown in Figure 2 and Figure 3.


The cyclic voltammogram of copper complex (0.1 M) shows a quasi reversible peak for the couple36: Cu(II) _ Cu(III) at Epa = 0.40 V with the direct cathodic peakfor Cu(II) _ Cu(III) at Epc = 0.34 V. Further, it shows two irreversible peaks characteristic for Cu(II) _ Cu(I) at Epc = -0.69 V and Cu(I) _ Cu(0) at Epc = -1.06 V reduction. In the anodic side the peak oceurs due to the direct oxidation of Cu(0) - Cu(I) at Epa = -0.24 V.

The cyclic voltammogram for the vanadyl complex, recorded in DMSO solution shows two well defined one-electron transfer redox peaks, corresponding to the formation of the VO(IV)/VO(V) couple at Ep = 0.46 V, Epc = 0.34 V and VO(IV)/VO(III) couple37 at Epc = -1.03 V and Epa = -0.21 V. The peak current functions of both waves in complex are different which indícate the involvement of two different electroactive species in solution corresponding to VO(V) and VO(III).

Antimicrobial activity

For in vitro antimicrobial activity, the investigated compounds were tested against the bacteria Salmonella typhi, Staphylococcus aureus, Escherichia coli and Bacillus subtilis and fungi Aspergillus niger, Aspergillus flavus and Rhizoctonia bataicola. The mínimum inhibitory concentration (MIC) valúes of the investigated compounds with the standard drugs are summarized in Table 3. Antimicrobial activity of the metal chelates can be explained on the basis of chelation theory. On chelation, the polarity of the metal ion will be reduced to a greater extent due to the overlap of the ligand orbital and partial sharing of the positive charge of the metal ion with donor groups. Further, it increases the delocalization of π-electrons overthe whole chelate ring and enhances the penetration of the complexes into lipid membranes and blocking of the metal binding sites in the enzymes of microorganisms. These complexes also disturb the respiration process of the cell and thus block the synthesis of proteins, which restricts further growth of the organisms38.


DNA studies

In the present study, the CT-DNA gel electrophoresis experiment was conducted at 35°C using our synthesized complexes in the presence of H202 as an oxidant. As can be seen from the results (Figure 4), at very low concentration, few complexes exhibit nuclease activity in the presence of H202. Control experiments using DNA alone do not show any significant cleavage of CT-DNA even on longer exposure time. From the observed results, it is observed that in presence of H202 the copper (lane 2) and nickel complexes (lane 3) cleave DNA more efficiently than the other complexes (lanes 4-9) and the control DNA. Further, the presence of a smear in the gel diagram indicates the presence of radical cleavage39.


CONCLUSIONS

In this work, few novel 14 membered tetraazamacrocyclic transition metal complexes have been synthesized and characterized on the basis of analytical and spectral data. All the complexes exhibit square-planar geometry around the central metal ion except VO(IV) complex which has square-pyramidal geometry. The antimicrobial screening data show good results. The interaction of these complexes with CT-DNA was investigated by gel electrophoresis. From the observation, it is found that the copper and nickel complexes cleave DNA more efficiently than the other complexes and the control DNA.

ACKNOWLEDGEMENTS

The authors express their sincere thanks to the Managing Board, Principal and Head of the Department of Chemistry, VHNSN College, Virudhunagar for their constant encouragement and providing research facilities. JD thanks the Tamilnadu Government and AS to the UGC, New Delhi for financial assistance.

 

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(Received: June 31, 2007 -Accepted: March 5, 2008)

 

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