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Journal of soil science and plant nutrition

versão On-line ISSN 0718-9516

J. Soil Sci. Plant Nutr. vol.16 no.2 Temuco jun. 2016  Epub 04-Maio-2016 


Isolation of efficient phosphate solubilizing bacteria capable of enhancing tomato plant growth


J. A. Sharon1, L.T. Hathwaik1, G.M. Glenn1, S. H. Imam2, and C.C. Lee1*


1United States Department of Agriculture, ARS-WRRC, 800 Buchanan Street, Albany, California 94710, USA. *Corresponding author:

2FlozymeCorporation, Inc., P.O. Box 260003, Plano, Texas 75026, USA



Phosphorus is one of the three macronutrients that are essential for plant growth and development. Inorganic phosphorus (P), which can make up to 70% of the total P content in soils, can exist in calcium-, aluminum-, or iron-complexed forms that are unavailable for plant use. As a result, mineral phosphorus, P2O5, is often used as a fertilizer to supplement the nutrient for crop growth. To reduce the addition of mineral phosphorus to agricultural soils, research in naturally occurring phosphate-solubilizing microorganisms has been conducted for decades. This study found bacteria that solubilized phosphate at very high rates. The most efficient of the bacteria presented in this paper, Pantoea sp. Pot1, can solubilize tricalcium phosphate (Ca3(PO4)2) at a rate of 956 mgL-1. This bacteria produces a variety of organic acids, including acetic, gluconic, formic, and propionic acids. Greenhouse experiments demonstrated that tomato plants with soil systems inoculated with Pantoea sp. Pot1 incorporated more P and produced much higher biomass weights than those plants without any added bacteria.

Keywords: Biofertilizer, Pantoea, phosphate solubilization, tomato growth stimulation

1. Introduction

Phosphorus (P) is a macronutrient that is essential for plant growth and development. It is a component of biological molecules, such as DNA, RNA, ATP, and phospholipids, and on a macro level, it affects root development, stalk and stem strength, crop maturity, and nitrogen fixation in legumes (Khan et al., 2009). Phosphorus in soils can exist in both organic (Po) and inorganic (Pi) forms; the inorganic forms of phosphorus have been calculated to account for 35 – 70% of total P in soil (Harrison, 1987). While some P minerals, like apatites and strengites, have very slow release rates, other P minerals, complexed with calcium, aluminum, or iron, have faster dissolution rates that are dependent on the pH of the surrounding soil and on the size of the particles (Pierzynski et al., 2005). Higher soil pH values (basic) cause aluminum and iron-complexed P to become more soluble, while lower soil pH values (acidic) promote the solubility of calcium-complexed P (Wang and Nancollas, 2008). Since the concentration of available P in soil is lower than what is found in healthy plant tissues, it is common agricultural practice to apply mineral P fertilizers in the form of readily-available monocalcium phosphate or monopotassium phosphate (Schachtman et al., 1998). However, with the efficiency of the fertilizer hovering between 10 – 25% (Isherwood, 1996), a large majority of that P also becomes immobilized in inorganic and organic forms (Khan et al., 2009). Consequently, P fertilizers have become the largest market for phosphorus worldwide. Due to the demand of agriculture on global stocks of P, it is estimated that the world will reach its maximum rate of quality mineral P production by 2040 at which point production will decline while agricultural demand will continue to rise (Schroder et al., 2010). Since P supplies are not easily replenished in comparison to nitrogen, it is important to better utilize P reserves in the soil and reclaim chemically-bound P (Cordell et al., 2009).

Phosphate-solubilizing bacteria (PSB) in the plant rhizosphere play a significant role in releasing P from its insoluble complexes to a form that is more readily usable by plants. The inorganic forms of P can be solubilized by microorganisms that secrete low molecular weight organic acids to dissolve phosphate-complexed minerals (Goldstein, 1995) and/or chelate cations that partner with P ions (PO43-) to release P directly into the surrounding soil solution system (Vyas and Gulati, 2009).With the current public interest in promoting more sustainable agricultural practices, using PSB, either in conjunction with or as a replacement for expensive and environmentally damaging fertilizers, would be advantageous to the agricultural industry (Barea, 2015).

Thus far, there have been decades of research on phosphate-solubilizing microorganisms which have been transferred to industrial practices since the 1950s (Krasilinikov, 1957). Specifically, soil bacteria from genera Pseudomonas, Bacillus, Rhizobium, and Enterobacter have been thought to be the most powerful P solubilizers (Hassan and Bano, 2015; Whitelaw, 1999). The less studied Pantoeagenus contains several phosphate-solubilizing bacteria such as P. agglomeran (Son et al., 2006), P.eucalypti (Castagno et al., 2011), P. ananatis (Oliveira et al., 2009), P. vagans (Rfaki et al., 2014), and Pantoea sp. LUP (Jorquera et al., 2008).

This study represents an effort to isolate bacteria with the ability to effectively solubilize phosphate for plant utilization. We isolated a bacterium, Pantoea sp. Pot1, with efficient phosphate solubilization capabilities from an organic garden. When the bacterium was used as an inoculant in greenhouse experiments with tomato plants, this strain was found to be a very effective biofertilizer.

2. Materials and Methods

2.1. Soil sample collection

The roots of tomato (Solanum lycopersicum) and potato (Solanum tuberosum) plants and the immediate surrounding soil were collected in sterile sample bags from the Karl Linn Community Garden in Berkeley, California, USA. The plant roots and soil samples were transported to the laboratory, and portions were immediately plated for rhizobacteria isolation. The remainder of each sample was preserved at 4 oC for further analysis.

2.2. Isolation of phosphate-solubilizing bacteria from tomato and potato samples

Approximately 2g of soil was scraped from the roots of each sample and deposited into sterile tubes containing 2 ml of sterile deionized (DI) water. Each test tube was vortexed thoroughly and a series of 10-fold dilutions was prepared down to 10-9. 100μl from each dilution was plated onto both Luria-Bertani (LB) media and Pikovskaya (PVK) media agar plates (Pikovskaya, 1948). The PVK medium contained (in g L-1) 10 glucose, 0.5 yeast extract, 0.5 (NH4)2SO4, 0.1 MgSO4.7H20, 5 Ca3(PO4)2, 0.2 KCl, 0.002 MnSO4.2H20, 0.002 FeSO4.7H20, and 15 agar. The insoluble Ca3(PO4)2 was washed with DI water and centrifuged to remove soluble phosphate contaminants. The supernatant was discarded, and the wet Ca3(PO4)2 was dried by using a vacuum-flask apparatus.

The colonies that grew on the LB agar plates were used to determine the overall rhizospheric bacteria count for each plant sample. The colonies that produced clearing zones in the PVK agar plates were isolated. Individual colonies from the isolation were then respotted onto new PVK plates for better analysis of clearing zone formation. All plates were incubated at 30 oC for up to 7 days. All isolates from the potato and tomato rhizospheres were named with the prefixes "Pot" and "Tom", respectively.

A modified version of the PVK was also made to test the capability of the microorganisms to solubilize aluminum phosphate (AlPO4) and iron phosphate (FePO4). Each of these was made with the same PVK medium recipe except for the substitution of Ca3(PO4)2 with either 5 gL-1 of AlPO4 or 5 gL-1 of FePO4.4H2O.The addition of agar was omitted for any experiments using liquid growth media.

2.3. Quantitative determination of phosphate solubilizing activity on agar medium

The clearing zones formed by the bacteria on the respotted plates were quantified on the 7th day of incubation using the following equation 1:

2.4. Quantitative determination of phosphate solubilization in PVK liquid medium

The isolates were grown in the PVK liquid medium to better quantify the rates of P solubilization. 200 µl of each culture (1 x 108cfu ml-1) were inoculated into 9.8 ml of PVK medium with 0.5% Ca3(PO4)2 (w/v) and incubated in a shaker at 30 oC. Analogous cultures were grown which contained either 0.5% AlPO4 or 0.5% FePO4 instead of Ca3(PO4)2. At various times, 1ml of each culture was collected and centrifuged at 14,000 rpm for 5 min. The solubilized P in the supernatant was quantified at each time point using the phosphate colorimetric kit (Sigma-Aldrich, MO, USA). The colorimetric assay was used in conjunction with a spectrophotometer which measured the absorbance of each sample at 650 nm.

2.5. Quantitative determination of phosphate solubilization in potting sand matrix

To determine the efficacy of P solubilization in sand, a 5 ml reaction containing 9 g of sand (acid washed and sterilized as described in 2.8), 1 ml of PVK containing 5% Ca3(PO4)2, and with or without Pantoea sp. Pot1 (final concentration of 2x106 cfu ml-1) was added to a 15 ml test tube. Samples were incubated at 30 ˚C for 24 h. After incubation, distilled water was added to a final volume of 10 ml, the samples were shaken at 200 rpm for 1 h, and centrifuged at 3,500 rpm. The supernatant was then filtered through a 0.45 μm filter. P released was measured using the phosphate colorimetric kit (Sigma-Aldrich) as described above.

2.6. Determination of organic acid production

Organic acid production and identification were determined by collecting three 1 ml aliquots from each culture at 24 h. The samples were centrifuged to pellet the cells, and the media was filtered through a 0.45 μm PVDF filter plate (Greiner, NC, USA). The samples were then centrifuged again at 3,500 rpm for 10 min to remove any residual cell particles, and the supernatant was collected in a 96-well plate (Greiner, NC, USA). Organic acids were analyzed by HPLC (Agilent 1200 series; Agilent, CA, USA) equipped with a binary pump, an HPX-87H column (Bio-Rad, CA, USA), and an RI detector. Mobile phase was 10 mM H2SO4, flow rate was 0.5mL min-1, column compartment was 85 ˚C, and the RI detector was operated at its maximum of 55 ˚C. External calibration was used to identify and quantify the products based on organic acid standards (acetic, butyric, isobutyric, formic, propionic, lactic, malic, gluconic).

2.7. Characterization of isolates

All isolates were subjected to Gram stains and microscopy analysis for cell type. Isolation streaking and spread plating revealed colony morphologies (color, shape, margins, diameter, opacity, and texture). In addition, all isolates were characterized genotypically by cloning and sequencing the 16S rRNA. Briefly, the genomic DNA from a pure culture of each isolate was extracted and purified for PCR amplification of the 16S rRNA sequence using Pfu Ultra II Fusion HS DNA polymerase (Agilent, CA, USA) and the 27 f (5,-agagtttgatcmtggctcag-3,) and 1525r (5,-aaggaggtgwtccarcc-3,) primers. The amplification was conducted in a GeneAmp PCR System 2700 thermocycler (Applied Biosystems, CA, USA) using the following program: 95 ˚C for 5 min; 30 cycles at 72˚C for 30s, 55˚C for 30s, and 72˚C for 90s; and 72 ˚C for 7 min.  The amplified 16S rRNA genes were cloned (Clone Jet; Thermo Fisher, MA, USA) and sequenced

(ABI 3730xl; Applied Biosystems) and subjected to BLAST analysis (Altschul et al., 1990).

2.8. Greenhouse testing

Clean-graded, kiln-dried Monterey sand (Cemex, CA, USA) was used as the potting medium. To further purify the sand of residual contaminants, the sand was acid-washed with 0.1 M hydrochloric acid (HCl). The sand was submerged in the 0.1 M HCl for 24 h, drained, and washed with 3 submersions of DI water. The pH of a small portion of sand was tested after the final rinse and, when necessary, calcium carbonate (CaCO3) was added to adjust and raise the pH to between 7.0-7.8. The CaCO3 did not exceed 0.2% of the total sand medium. The acid-washed, neutralized sand was then autoclave sterilized.

Tomato seeds were sown into seedling trays containing the acid-washed sand. After 7 days of growth, seedlings were transplanted to larger pots (11 cm x 11 cm) containing 950 g of sand. All plant growth took place at 32 ± 5˚C in a greenhouse with a daylight cycle of 16 h.

After the transplantation to larger pots, the plants were subjected to different feeding conditions. The experiment consisted of 4 conditions in triplicate for a total of 12 pots. The conditions were (1) no phosphate source, (2) Pantoea sp. Pot1, (3) Ca3(PO4)2, and (4) Ca3(PO4)2 + Pantoea sp. Pot1. The Pot1 strain was chosen based on its superior P solubilization characteristics. The plants were all fed a modified Steiner (MS) nutrient solution (Steiner, 1984) that contained (in μlL-1) 350 of 1 M Ca(NO3)2.4H2O, 1500 of 1 M KNO3, 98 of 1 M MgSO4.7H2O, 500 of the micronutrient solution, and 60 of 0.09 M FeNa-EDTA. The micronutrient solution contained (in gL-1) 2.86 of H3BO3, 1.81 of MnCl2.4H2O, 0.22 of ZnSO4.7H2O, 0.1 CuSO4.5H2O, and 0.025 of NaMoO4. An MS solution minus phosphate was also prepared and denoted the "no phosphate source" solution. A separate suspension of insoluble Ca3(PO4)2was washed and prepared as described above to a final concentration of 770 μM. All the solutions were sterilized through autoclaving. For the bacterial inoculum, the Pantoea sp. Pot1 was grown to a concentration of 1 x109 cfu ml-1.

Based on recommendations from Louisiana State University Agricultural Department (Koske et al., 2005) and Salokhe et al. (2005), the plants were watered with 100 ml of the appropriate MS solutions from the day of transplant to day 28 (4 weeks) of growth. From day 29 (week 5) to day 56 (week 8), all the plants received 200 ml of the appropriate solutions. Tenml of Ca3(PO4)2 suspension (as described above) were added to the appropriate pots daily. Ten ml of bacterial culture were added to all appropriate pots once a week.

Every pot, regardless of receiving the bacterial treatment or not, was tested for bacterial counts on the day of transplant, day 28, and day 56 to determine both the bacterial levels of Pantoea sp. Pot1 as well as to establish the level of other bacterial contamination of the sterile potting medium over the length of the experiment. 1 g of potting medium was carefully taken from the root zone (so as not to damage the established roots). This sample was mixed with 2 ml of sterile DI water for dilution plating.

On day 56 after transplant, after the final potting medium samples were taken, each plant shoot and root system was washed with water to remove the potting medium. After patting the plants dry to remove the surface water from the washing, the shoots were separated from the roots. Each shoot with the corresponding root was sealed in a separate porous paper bag to allow air to travel through the bag during the drying process. All the tissues were dried in a gas-fired, circulating lab dryer at 75˚C for 18 h. Each shoot and root was weighed after the drying process, and these data were statistically analyzed.

P concentration in dried plant tissue was determined by conducting North American Proficiency Testing (NAPT) method 4.30 (A & L Western Agricultural Laboratories, CA, USA).

2.9. Statistical analysis

The data was subjected to analysis of variance (ANOVA) using the SigmaStat software (Systat Software Inc., CA, USA). Statistical analysis between groups was performed using 1- way ANOVA and Holm-Sidak method for multiple comparisons using the Sigma Stat software. The analysis was based on at least two or three replications of every experiment that produced quantitative data. P<0.05 was considered statistically significant.

3. Results

3.1. Isolation of phosphate-solubilizing bacteria

Rhizospheric soil samples from potato and tomato plants were collected at an organic community garden in an effort to analyze samples that were least affected by constant agricultural turnover and mineral fertilizer addition. To screen for phosphate-solubilizing bacteria (PSB), the samples were spread on Pikovskaya (PVK) agar plates which contained insoluble phosphate. Although bacterial counts were similar between the rhizosphere of the tomato and the potato (approximately 1 x 109 cfu ml-1), the number of bacteria that created clearing zones in the PVK agar were greater in the potato sample (nine) compared to the tomato sample (two). Although an effort was made to collect samples from plants that were visibly presenting healthy characteristics, the discrepancy may be due to plant differences as well as nutrient differences in the micro-environment of the rhizosphere. Fiveunique PSB strains were collected from the potato sample (all isolates named with the prefix "Pot"), and two unique PSB strains were collected from the tomato sample (both isolates named with the prefix "Tom").

3.2. Microbe characterization

Seven of the isolates that created clearings on the PVK agar plates were characterized in more detail. All seven isolates were found to be Gram negative and ranged from 1-1.5 μm in diameter (Table 1). Four of the five isolates from the potato rhizosphere (Pot1, Pot2, Pot4, and Pot5) produced colonies that were small, circular, opaque, and bright yellow. The other isolate (Pot7) from the potato rhizosphere produced colonies that were slightly larger than the previous four and were opaque and white. The two isolates from the tomato rhizosphere produced circular colonies that were also opaque and white.

Table 1. Biochemical properties of isolated PSB strains.

Isolates from potato and tomato rhizospheres are identified as "Pot" and "Tom", respectively. All solubilization rates were measured from cultures grown for 24 h in liquid medium. The letters superscripted next to the values indicate statistical differences at P<0.05.

All the isolates were further characterized by PCR amplification, sequencing, and BLAST analysis of the 16S rRNA genes (GenBank KT726362-KT726372). Isolates from the potato sample (Pot1, Pot2, Pot4, and Pot5) showed >99% identity to various Pantoea species. The 16S rRNA genes from a potato isolate (Pot7) and tomato isolates (Tom1 and Tom2) all had >99% identity to various Enterobacter species. In fact, isolate Tom1 had 100% identity match to Enterobacter cloacae strain 34977. The 16S rRNA genes of the Pot1 isolate, which presented the highest level of phosphate solubilization activity (see below), were further characterized by subcloning the PCR products into plasmids and sequencing multiple clones. Six different 16S rRNA genes were discovered in the Pot1 isolate and all showed >99.5% identity to 16S rRNA genes from various Pantoea species, including Pantoeavagans C9-1 (GenBank NC_014562.1), a commercial strain used as a biocontrol agent (BlightBan C9-1; NuFarm Americas, NC, USA). Therefore, our isolate with the highest phosphate solubilization activity was designated Pantoea sp. Pot1.

3.3. Phosphate solubilization on agar, liquid, and sand medium

Each of the seven isolates was re-inoculated onto a PVK agar plate. The largest clearing zone, created by Pantoea sp. Pot1, had a solubilization index of 150 (Table 1). Pantoea sp. Pot5 had a smaller index of 120. At the lowest end, Enterobacter sp. Pot7 presented a clearing zone with an index of 9.1. The tomato rhizosphere isolates had significantly smaller indexes compared to Pantoea sp. Pot1.

The quantification of clearing zone activity on an agar plate provided an imprecise measure of phosphate solubilization potential. Therefore, all 7 isolates in this study were subjected to additional quantification in the PVK liquid medium. As on the agar solubilization assay, the highest P solubilizing activity was found in Pantoea sp. Pot1 (956 mg L-1), while the lowest activity (328 mg L-1) was found in Enterobacter sp. Tom2 (Table 1).There was much less solubilization from the other complexed phosphate sources. There was approximately 10-fold less phosphate released from the FePO4 by most of the isolates (Table 1). Furthermore, no more than 0.5 mg L-1 of phosphate was solubilized from the AlPO4 by any isolate (data not shown).

Additionally, to test if the bacteria could solubilize P in potting medium (sand matrix), Pantoea sp. Pot1 was incubated in sand and Ca3(PO4)2. After 24 h incubation at 30 ˚C, the bacteria released 111.7 ± 7.5mg L-1.

3.4. Organic acid production

All sevenisolates were able to produce some types of organic acid in the PVK liquid culture after a 24 h growth period (Figure 1a). After the HPLC analysis of the culture filtrates, the presence of acetic, propionic, lactic, gluconic, malic, formic, and isobutyric acids were found. The acetic acid production was found to be the highest and malic acid was the lowest produced amongst the seven isolates. Pantoea sp. Pot1 produced both the largest amount of acetic acid as well as the most types of acids (acetic, formic, gluconic, and propionic acids) in comparison to the other isolates.

Figure 1. Bacterial acid production and effect on plant growth. (a) Production of organic acids by PSB isolates grown in PVK liquid medium after 24 h of incubation. Bars indicate standard error (n=3). (b) Greenhouse trial testing the application of Pantoea sp. Pot1 on soluble phosphorus-deprived tomato plants. Left, plant provided with only insoluble Ca3(PO4)2. Right, plant provided with both Pantoea sp. Pot1 and insoluble Ca3(PO4)2

3.5. Efficacy of Pantoea sp. Pot1 to plant growth

Based on its high phosphate solubilization efficiency, Pantoea sp. Pot1 was chosen for soil application for Roma tomato (Lycopersicon esculentum) plant growth in greenhouse testing. The bacterial counts of Pantoea sp. Pot1, that were added weekly at a concentration of 1 x 109 cfu ml-1, were found to have similar amounts at the end of each week, usually varying from 6 x 108 cfu mL-1 to 3 x 109 cfu mL-1. This greenhouse experiment used acid-washed sand as the growth medium. This medium was used to evaluate whether the isolate could form a rhizospheric relationship with the tomato roots while also conferring the phosphate solubilizing benefit (to the phosphorus-deprived plants) without depending on the soil system for survival.

Initial growth trials were conducted in which soil containing insoluble Ca3(PO4)2 was supplemented with or without Pantoea sp. Pot1. The results clearly show that Pantoea sp. Pot1 was capable of enhancing plant growth in the presence of insoluble Ca3(PO4)2 (Figure 1b). Plants supplemented with both Pantoea sp. Pot1 and Ca3(PO4)2 (right) had much more growth than those with only Ca3(PO4)2 (left). Thus, the cell count and growth data from the experiment show that Pantoea sp. Pot1 was not only able to survive on the tomato root exudates (carbohydrates, amino acids, etc.), but was also likely able to release the phosphate from the insoluble Ca3(PO4)2 and make it available for use by the tomato plants.

To better quantify the degree of growth stimulation by Pantoea sp. Pot1 and Ca3(PO4)2, we planted fresh seedlings under a variety of conditions and measured the resulting plant biomass. The dry weights of the shoots and roots of the tomato plants that were tested in the greenhouse experiments were significantly higher in the treatments that received both insoluble Ca3(PO4)2 and Pantoea sp. Pot1, in comparison to the treatments that didn’t receive any phosphate or bacteria (Figure 2). Comparing the dry shoot weights of the plants that received only the Ca3(PO4)2 versus those that received both Ca3(PO4)2 and Pantoea sp. Pot1, the plants inoculated with bacteria in the rhizosphere experienced 3 times increased growth. Likewise, the dry root weight showed a similar trend with 6 times greater root development from the plants with Ca3(PO4)2 and Pantoea sp. Pot1 in comparison to those with only Ca3(PO4)2. The phosphorus concentrationin the plant tissue was significantly higher in plants supplemented with Pantoea sp. Pot1 (0.32%) compared to those that received no bacteria (0.17%) when Ca3(PO4)2 was provided.

Figure 2. Dry shoot and root weights of tomato plants after 8 weeks (56 days) of growth. Each column within each group represents an exposure to different conditions. "-Pot1" indicates that no bacteria were added to those plants; "+Pot1" indicates that the Pantoea sp. Pot1 bacteria was added to those plants; "+TCP" indicates that insoluble Ca3(PO4)2 was added to those plants. Columns with the identical letters within each set were not found significantly different at P<0.05 when compared by pair wise multiple comparisons. Means were calculated from three replicates of each condition.

4. Discussion

In this study, we screened for phosphate-solubilizing bacteria from samples collected at an organic farm. We found that bacteria closely associated with potato roots solubilized significantly more Ca3(PO4)2 than those from tomato roots. This difference could be due to the differences in the makeup of the rhizospheric microbial communities between various plant species. Smalla et al. (2001), when characterizing the rhizosphere based on host plant dependence, discovered that rhizospheric communities were similar between oilseed rape and potato plants, but both these communities varied from the community present in the strawberry rhizosphere. Likewise, Grayston et al. (1998) discovered that different plant species exude various amounts and types of carbohydrates, carboxylic acids, and amino acids, all of which can highly influence the type of microorganisms that colonize the rhizosphere.

One mechanism by which phosphate can be released from the tricalcium complex is by decreasing the pH of the surrounding medium through the secretion of organic acids (Carrillo et al., 2002). In general, previously identified phosphate-solubilizing microorganisms produce gluconic acid which is very effective at reducing the pH and, therefore, enhancing phosphate solubilization (Rodrı́guez and Fraga, 1999). However, this was not the case with any of these seven isolates. For the purpose of reducing the pH of the medium, the acids that were secreted, primarily acetic acid, were sufficient to solubilize the Ca3(PO4)2 present.

Additionally, the low rates of solubilization when the isolates were grown in culture with either AlPO4 or FePO4 can be explained by this acidification mechanism of solubilization (Table 1). Aluminum (Al3+) and iron (Fe3+) form insoluble complexes with the phosphate ion (PO43-) in acidic environments (Rodrı́guez and Fraga, 1999), thus our isolates were inefficient in solubilizing FePO4 and was unable to solubilize the phosphate complexed with aluminum.

One of our strains had the highest level of phosphate solubilization from the insoluble tricalcium complex in liquid culture ever reported to our knowledge. This strain was characterized and designated Pantoea sp. Pot1, and its rate of Ca3(PO4)2 solubilization significantly exceeded that of other studied microorganisms, such as Pantoea agglomerans (200 mg L-1) (Son et al., 2006), Pseudomonas fluorescens (184 mg L-1) (Katiyar and Goel, 2003), Pseudomonas putida (247 mg L-1) (Pandey et al., 2006),Bacillus megaterium (140 mg L-1) (El-Komy, 2005), and Enterobacter cloacae (127 mg L-1) (Chung et al., 2005). It should be noted that such comparisons should be evaluated with the caveat that the potential variability of media and growth conditions among different laboratories may have a significant impact.

When Pantoea sp. Pot1 was used to supplement tomato plants fed with insoluble phosphate, there was greatly increased plant growth which correlated with higher P uptake in the plant tissue.  Thus, Pantoea sp. Pot1 represents a promising candidate for biofertilizer development in regions with high calcium-bound phosphate levels.


We thank the Karl Linn Community Garden in Berkeley, California, USA for access to collect plant samples.This work was supported by the United States Department of Agriculture CRIS 2030-41000-058-00 and a grant from the California Department of Food and Agriculture (# SCB13051). The mention of firm names or trade products does not imply that they are endorsed or recommended by the US Department of Agriculture over other firms or similar products not mentioned. USDA is an equal opportunity provider and employer.


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